New York Medicaid Waivers for Autism Services: What Families Need to Know

In short: New York offers several Medicaid waivers that can cover autism services, including the HCBS Waiver for Children with Autism and the Care at Home waivers. These waivers can fund Applied Behavior Analysis (ABA) therapy, speech therapy, and other supports. Eligibility is based on diagnosis, age, and financial need, and families must apply through their local Department of Social Services or the NY State Department of Health.
Key takeaways
- New York's HCBS Waiver for Children with Autism covers ABA therapy, speech therapy, and other services for children under 21.
- Care at Home waivers (I, II, and VI) also provide autism-related supports for children with significant medical needs.
- Eligibility requires a formal autism diagnosis, financial criteria (often Medicaid eligibility), and a functional need assessment.
- Services are typically provided in-home, in community settings, or at clinics, depending on the waiver.
What Are New York Medicaid Waivers for Autism Services?
New York Medicaid waivers are special programs that allow the state to use Medicaid funds to provide home and community-based services (HCBS) to individuals who might otherwise need care in an institution. For families of children with autism, these waivers can be a lifeline, covering therapies like Applied Behavior Analysis (ABA), speech therapy, occupational therapy, and respite care. Unlike standard Medicaid, waivers can offer more flexible, person-centered services tailored to a child's needs.
In New York, the main waiver for autism is the HCBS Waiver for Children with Autism Spectrum Disorder (ASD), also known as the Autism Waiver. Additionally, the Care at Home waivers (I, II, and VI) serve children with complex medical needs, including those with autism who have significant health challenges. These waivers are designed to keep children in their homes and communities, reducing the need for institutional care.

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Who Is Eligible for New York Autism Waivers?
Age and Diagnosis Requirements
To qualify for the HCBS Autism Waiver, a child must be under 21 years old and have a formal diagnosis of autism spectrum disorder from a qualified professional (such as a developmental pediatrician or psychologist). The diagnosis must be documented in medical records. For Care at Home waivers, children must be under 18 and have a medical condition that requires a nursing level of care, which can include severe autism with co-occurring medical issues.
Financial Eligibility
Most waivers require the child to be eligible for Medicaid. This means the family's income and resources must fall within certain limits, though New York has expanded Medicaid under the Affordable Care Act, making it easier for many families to qualify. Some waivers also have a spend-down option for families with higher incomes. It's important to apply for Medicaid first, then request a waiver.
Functional Need
The child must demonstrate a need for home and community-based services, such as needing help with daily living skills, communication, or behavior management. An assessment by a qualified professional (like a social worker or nurse) will determine the level of need. For the Autism Waiver, the child must require at least one service that is not available through standard Medicaid.
What Services Do New York Autism Waivers Cover?
Applied Behavior Analysis (ABA) Therapy
ABA therapy is a core service under the Autism Waiver. It is a scientifically validated approach that helps children develop skills and reduce challenging behaviors. Services can include one-on-one therapy, parent training, and behavior intervention plans. Providers must be BCBA-led (Board Certified Behavior Analyst) to ensure quality care. Our free matching service can connect you with BCBA-led providers who accept New York Medicaid waivers.
Other Therapies and Supports
Beyond ABA, the waivers can cover speech therapy, occupational therapy, physical therapy, and social skills training. Respite care gives parents a break, while habilitation services help children with daily living tasks. Case management and family training are also available. For Care at Home waivers, nursing services, medical equipment, and home modifications may be included.

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How to Apply for a New York Autism Waiver
Step 1: Determine Eligibility
Start by ensuring your child has a current autism diagnosis and that your family meets Medicaid financial criteria. You can apply for Medicaid through the New York State of Health marketplace or your local Department of Social Services (DSS). If you already have Medicaid, you can proceed to the waiver application.
Step 2: Contact Your Local DSS or the NYS Department of Health
For the Autism Waiver, contact your local DSS or the New York State Department of Health's Division of Long Term Care. They will provide the necessary forms and guide you through the process. For Care at Home waivers, you can call the NYS Department of Health's Care at Home program directly. Be prepared to provide medical records, a diagnosis letter, and financial documents.
Step 3: Complete an Assessment
A case manager or nurse will conduct a functional assessment to determine your child's needs. This may involve interviews, observation, and review of medical records. Based on the assessment, a service plan will be developed outlining the types and hours of services needed.
Step 4: Wait for Approval
Approval can take several months, and waitlists for waivers can be long, especially for the Autism Waiver. Some families wait a year or more. During this time, you can use other resources like Early Intervention (for children under 3) or school-based services. Our free service can help you find providers who may offer private pay or other funding options while you wait.
Common Mistakes to Avoid When Applying for Waivers
- Not applying for Medicaid first: You cannot get a waiver without Medicaid eligibility. Apply for Medicaid as soon as possible.
- Missing deadlines: Waiver applications have specific enrollment periods or deadlines. Stay in touch with your local DSS to avoid missing them.
- Incomplete documentation: Ensure all medical records, diagnosis letters, and financial forms are complete and up to date. Missing paperwork can delay the process.
- Assuming only one waiver applies: If your child has complex medical needs, explore both the Autism Waiver and Care at Home waivers. You may qualify for more than one.
- Not seeking help: The application process can be overwhelming. Reach out to parent advocacy groups, like the Autism Society of New York, or use our free matching service for guidance.

How to Find Providers That Accept New York Medicaid Waivers
Once your waiver is approved, you'll need to find a provider that accepts Medicaid and is experienced with autism therapies. Not all ABA providers accept waivers, so it's important to ask directly. Our free service, Find ABA Near Me, can match you with vetted, BCBA-led providers in your area who accept New York Medicaid waivers, including the Autism Waiver and Care at Home programs. We take the hassle out of searching, so you can focus on your child's care.
When contacting providers, ask about their experience with waivers, wait times, and whether they offer in-home or clinic-based services. Many providers have dedicated staff to help with billing and authorization, making the process smoother for families.